PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004487166.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 246aa    MW: 27619.5 Da    PI: 6.6855
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004487166.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH421.6e-1360106354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+e+ErrRR+riN  +++Lr+++P a      Kl+Ka+ L +++ ++k+L
  XP_004487166.1  60 KNHSEAERRRRARINAHLDTLRTVIPGA-----NKLDKASLLAEVITHLKEL 106
                     58*************************8.....6****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.95557106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-1358114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.3E-1160106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.5E-1361127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.8E-1263112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.74E-470107No hitNo description
SuperFamilySSF550214.3E-5145221No hitNo description
Gene3DG3DSA:3.30.70.2603.8E-6145199No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MEMEDFDPMR INDGFQGVIG SGYASSSSLV LDRERGELVE ASVKLERKGV SPERSIEALK  60
NHSEAERRRR ARINAHLDTL RTVIPGANKL DKASLLAEVI THLKELKINA AEASEGLMIP  120
KDNDEIRVEE QESGLNGFPY SIRASLCCEY KPGLLSDIRQ ALDALHLMII RAEIATLGGR  180
MKNVFVIISC KEQNFEDVEY RRFLAGSVHQ ALKSVLDRFS VSQDILENRK RRRISIFSSS  240
SLGDFL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1228232RKRRR
2229233KRRRI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004487166.11e-179PREDICTED: transcription factor bHLH30-like
TrEMBLI3SSI41e-145I3SSI4_LOTJA; Uncharacterized protein
STRINGGLYMA12G14400.11e-141(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106852538
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-32bHLH family protein